Today's date: 9/19/05
PCR name: Cre (E)
Purpose: Determine presence of Cre transgene(s); does not distinguish between one copy or two
Samples:
1  
2  
3  
4  
5  
# of rxns
Reactions (ul): X 4 Profile name: Cre (E)
DNA 1   step time (min:sec) temp (C)
H20 13.5 54 1 15:00 95
10X buffer 2 8 2 :30 94
4mM dNTPs 1.5 6 3 :20 60
10pmol/ul primers 4 :45 72
567 0.5 2 go to step 2 36 times
568 0.5 2 5 10:00 72
(control) 42 0.5 2 6 hold 4
(control) 43 0.5 2
20 ul 76 ul
+ HotStar Taq 0.18 ul 0.72 ul
Primers: Sequence: (5' to3')           Tm
567 ACCAGCCAGCTATCAACTCG 58.0
568 TTACATTGGTCCAGCCACC 55.8
(control) 42 CTAGGCCACAGAATTGAAAGATCT 56.3
(control) 43 GTAGGTGGAAATTCTAGCATCATCC 56.8
Products: from allele(s) length (bp) digests?   primers    
internal control all 325 42 + 43
Cre Tg Cre 200 567 + 568
Genotypes: bands              
+/+ 325
Cre/+ 325, 200
Cre/Cre 325, 200